ENVS2401 Sequencing analyses in environmental sciences (5 cr)
Study level:
Advanced studies
Grading scale:
0-5
Language:
English
Responsible organisation:
Department of Biological and Environmental Science
Curriculum periods:
2024-2025, 2025-2026, 2026-2027, 2027-2028
Description
This laboratory course introduces modern PCR- and sequencing-based techniques in molecular genetics in the context of environmental sciences and microbiology. Research question and the selection of methods can vary depending on the year and course. In addition to lab works, the course focuses on data analysis and bioinformatic analysis of the sequencing results using available program packages. Lab works are done in pairs with guidance.
Learning outcomes
- After this course the student
· has been familiarized to the next generation sequencing methods and their applications, and can independently prepare DNA and RNA samples for the sequencing process
· can use quantitative PCR-methods understanding the principles of these methods
· can analyse large sets of sequence data using bioinformatics tools
· is more confident in laboratory work, group work and presenting
Description of prerequisites
Bachelor's Degree completed or similar
Study materials
Instructions for laboratory works and other given material.
Completion methods
Method 1
Evaluation criteria:
Lectures, laboratory work and computer class. Presentations by the students.
Select all marked parts
Parts of the completion methods
x
Participation in teaching (5 cr)
Type:
Participation in teaching
Grading scale:
0-5
Language:
English