ENVS1134 Statistical methods for analyzing environmental data (5 cr)

Study level:
Advanced studies
Grading scale:
0-5
Language:
English, Finnish
Responsible organisation:
Department of Biological and Environmental Science
Curriculum periods:
2024-2025, 2025-2026, 2026-2027, 2027-2028

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Analyzing environmental data with the R program.

Description

An advanced course related to analysing environmental and spatial data with R Statistics software. Main topics include multivariate methods (for modelling, classification, clustering, and dimension reduction), machine learning, meta-analysis, analysis methods for time series, community composition analyses, and analysis methods for spatial data.

Learning outcomes

After completing this course, the student should be able to

  • Explain how the statistical methods introduced on this course work, and study their assumptions.
  • Study regular bivariate correlations and statistical significance of treatments using relevant methods.
  • Calculate effect sizes and response ratios, and combine results from several research studies with suitable meta-analysis methods.
  • Fit regression, dose – response, and mixed models to data containing independent observations, and perform predictor variable and model selection.
  • Use methods related to the analysis of time series, both in time domain and in frequency domain.
  • Perform classification, clustering, and projection for high-dimensional data, and use resampling methods for the selection of classifiers.
  • Use community composition analysis methods based on ordination.
  • Read spatial data into R, and apply some rather simple spatial analysis methods for them.
  • Use the R Statistics software well enough to solve an exercise work with it.

Description of prerequisites

TILP2400/TILP2500, TILP2600 (or other basic statistics courses), and BENA4033/BENA4053 Basics of geoinformatics (or other sufficient knowledge of geoinformatics).

Study materials

Lectures and exercises (including their solutions) will be put into Moodle.

Literature

  • Hastie T., Tibshirani R. & Friedman J. 2009. The Elements of Statistical Learning, 2nd Edition. Springer.; ISBN: 978-0-387-84857-0
  • Zuur A., Ieno E.N., Walker N., Saveliev A.A. & Smith G.M. 2009. Mixed Effects Models and Extensions in Ecology with R. Springer.; ISBN: 978-0-387-87457-9
  • Cryer J. & Chan K.-S. 2008. Time Series Analysis with Applications in R, 2nd Edition. Springer.; ISBN: 978-0-387-75958-6
  • Pebesma E. & Bivand R. 2023. Spatial Data Science: With Applications in R. Chapman and Hall/CRC.; ISBN: 978-0-4294-5901-6

Completion methods

Method 1

Description:
Both a seminar presentation during the course and an exercise work after the course need to be passed. They will be evaluated with scale 0-5.
Evaluation criteria:
Exercise work report 50%, seminar presentation 50%.
Time of teaching:
Period 3
Select all marked parts
Parts of the completion methods
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Teaching (5 cr)

Type:
Participation in teaching
Grading scale:
0-5
Language:
English, Finnish

Teaching